Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc17Q8CE13 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm14760-201ENSMUST00000121831 999 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm7666-201ENSMUST00000146631 819 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm22144-201ENSMUST00000157402 102 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm2517-201ENSMUST00000215651 348 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc17Q8CE13 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc17Q8CE13 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Gm9358-201ENSMUST00000183067 927 ntBASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc17Q8CE13 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms