Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm11930-201ENSMUST00000117788 190 ntBASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Gm8885-201ENSMUST00000189382 598 ntBASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm6963-201ENSMUST00000147879 379 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm2991-201ENSMUST00000173338 480 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm31256-201ENSMUST00000194705 506 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm19187-201ENSMUST00000206781 892 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm9368-201ENSMUST00000219348 831 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm7399-201ENSMUST00000032395 858 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc38Q8CDN8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc38Q8CDN8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms