Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm13350-201ENSMUST00000120519 479 ntBASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Gm42937-201ENSMUST00000197360 752 ntBASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm26956-201ENSMUST00000182176 986 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm18711-201ENSMUST00000199341 750 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc87Q8CDL9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm27023-201ENSMUST00000182372 285 ntBASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms