Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrif1Q8CDD9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm4986-201ENSMUST00000119731 549 ntBASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm9257-201ENSMUST00000221254 232 ntBASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lrif1Q8CDD9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms