Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gm20426-201ENSMUST00000173657 440 ntBASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Alx1Q8C8B0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm7666-201ENSMUST00000146631 819 ntBASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm24844-201ENSMUST00000158679 127 ntBASIC13.82□□□□□ -0.2
Alx1Q8C8B0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm43378-201ENSMUST00000199336 582 ntBASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.82□□□□□ -0.2
Alx1Q8C8B0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx1Q8C8B0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm22920-201ENSMUST00000102175 109 ntBASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm26047-201ENSMUST00000157308 113 ntBASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm26047-202ENSMUST00000198840 115 ntBASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm43138-201ENSMUST00000199123 708 ntBASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx1Q8C8B0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms