Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm38151-201ENSMUST00000195085 289 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm15036-201ENSMUST00000118880 400 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm8815-201ENSMUST00000173809 620 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm44315-201ENSMUST00000203041 219 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Gm40879-201ENSMUST00000220759 612 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.71□□□□□ -0.69
Col6a6Q8C6K9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col6a6Q8C6K9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Mir1905-201ENSMUST00000122779 82 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm15620-201ENSMUST00000122949 270 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm43852-201ENSMUST00000202098 917 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm43912-201ENSMUST00000204352 538 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm18514-201ENSMUST00000218980 436 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col6a6Q8C6K9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms