Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Mir7677-201ENSMUST00000184226 67 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm3332-201ENSMUST00000189337 928 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm807-202ENSMUST00000224929 408 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc30Q8BVF4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm2260-201ENSMUST00000184965 657 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm28937-201ENSMUST00000185413 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm29400-201ENSMUST00000187208 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm28686-201ENSMUST00000187404 609 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm28662-201ENSMUST00000188446 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm28251-201ENSMUST00000188835 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm37318-201ENSMUST00000194325 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm38017-201ENSMUST00000194768 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm37287-201ENSMUST00000195449 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm37793-201ENSMUST00000195548 695 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm6450-201ENSMUST00000200896 574 ntBASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc30Q8BVF4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Rubie-203ENSMUST00000227803 2430 ntBASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Gm14017-201ENSMUST00000121934 386 ntBASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc30Q8BVF4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.27■□□□□ 0.04
Ccdc30Q8BVF4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms