Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Snord83b-201ENSMUST00000104546 94 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm13612-201ENSMUST00000119276 390 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Proscos-202ENSMUST00000178990 666 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm8598-201ENSMUST00000221184 836 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm10146-201ENSMUST00000072739 309 ntBASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smco3Q8BQM7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm9083-201ENSMUST00000120423 819 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm44872-201ENSMUST00000207864 420 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm19163-201ENSMUST00000223313 780 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms