Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.19□□□□□ -0.46
Chmp2bQ8BJF9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Mir1247-201ENSMUST00000116706 82 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm9996-201ENSMUST00000070359 913 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.18□□□□□ -0.46
Chmp2bQ8BJF9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Chmp2bQ8BJF9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp2bQ8BJF9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms