Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm43118-201ENSMUST00000199149 775 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm18711-201ENSMUST00000199341 750 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf38Q8BI21 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Erich3-203ENSMUST00000189969 3460 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm11793-201ENSMUST00000120433 981 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm43630-201ENSMUST00000201550 776 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm6013-201ENSMUST00000212264 699 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm19994-201ENSMUST00000217086 586 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm9823-201ENSMUST00000051212 327 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm9996-201ENSMUST00000070359 913 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.49□□□□□ -0.57
Rnf38Q8BI21 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms