Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Gm19287-201ENSMUST00000203190 358 ntBASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim65Q8BFW4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm9192-201ENSMUST00000183221 985 ntBASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm27627-201ENSMUST00000183644 150 ntBASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim65Q8BFW4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm6114-201ENSMUST00000182472 968 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm29615-201ENSMUST00000185371 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm28224-201ENSMUST00000186078 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm29001-201ENSMUST00000186177 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm28292-201ENSMUST00000186593 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm28101-201ENSMUST00000187608 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm29076-201ENSMUST00000187689 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm28302-201ENSMUST00000187931 697 ntBASIC12.71□□□□□ -0.37
Trim65Q8BFW4 Gm28646-201ENSMUST00000188220 697 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms