Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm12712-201ENSMUST00000120676 801 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm22846-201ENSMUST00000157706 270 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm37852-201ENSMUST00000193027 350 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm8197-202ENSMUST00000193422 934 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm37826-201ENSMUST00000195329 322 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm10263-201ENSMUST00000085163 300 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 AC107763.1-201ENSMUST00000226082 1365 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm13700-201ENSMUST00000118624 1128 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Gm5870-201ENSMUST00000196461 282 ntBASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ttc28Q80XJ3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm9089-201ENSMUST00000122027 526 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm24943-201ENSMUST00000158329 433 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm9081-201ENSMUST00000182346 991 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm28833-201ENSMUST00000189671 559 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm5599-201ENSMUST00000209602 788 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ttc28Q80XJ3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Gm11560-201ENSMUST00000117567 948 ntBASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Gm17825-201ENSMUST00000206836 794 ntBASIC9.93□□□□□ -0.82
Ttc28Q80XJ3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms