Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm15566-201ENSMUST00000121130 590 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm8194-201ENSMUST00000159783 859 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm7600-201ENSMUST00000209657 785 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.38□□□□□ -0.59
Vrk1Q80X41 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vrk1Q80X41 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.38□□□□□ -0.59
Vrk1Q80X41 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm11628-201ENSMUST00000117568 171 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm15004-201ENSMUST00000119192 630 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm8815-201ENSMUST00000173809 620 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm9630-201ENSMUST00000178304 885 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm4034-201ENSMUST00000187674 480 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.37□□□□□ -0.59
Vrk1Q80X41 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vrk1Q80X41 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.36□□□□□ -0.59
Vrk1Q80X41 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vrk1Q80X41 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms