Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Scaf4Q6PFF0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gm38314-201ENSMUST00000195709 625 ntBASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Scaf4Q6PFF0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm12490-201ENSMUST00000120255 560 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm25043-201ENSMUST00000158604 212 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm6114-201ENSMUST00000182472 968 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm18893-201ENSMUST00000198416 943 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Lect2-202ENSMUST00000225183 823 ntBASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scaf4Q6PFF0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.68□□□□□ -0.54
Scaf4Q6PFF0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms