Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm12461-201ENSMUST00000120231 1239 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm15329-201ENSMUST00000121408 155 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm16459-201ENSMUST00000121443 686 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm14165-201ENSMUST00000121456 952 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm4982-201ENSMUST00000160440 1098 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gm7627-201ENSMUST00000183205 999 ntBASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slx4Q6P1D7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Gm25569-201ENSMUST00000157175 131 ntBASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.97■□□□□ 0.47
Slx4Q6P1D7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm12129-201ENSMUST00000120104 1147 ntBASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slx4Q6P1D7 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Gm14740-201ENSMUST00000118538 1150 ntBASIC17.96■□□□□ 0.46
Slx4Q6P1D7 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Gm45527-201ENSMUST00000211052 774 ntBASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slx4Q6P1D7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slx4Q6P1D7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC17.95■□□□□ 0.46
Slx4Q6P1D7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms