Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VclQ64727 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.72□□□□□ -0.53
VclQ64727 Gm12036-201ENSMUST00000120008 530 ntBASIC11.72□□□□□ -0.53
VclQ64727 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VclQ64727 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
VclQ64727 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VclQ64727 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
VclQ64727 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VclQ64727 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.71□□□□□ -0.53
VclQ64727 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
VclQ64727 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Gm12217-201ENSMUST00000118858 696 ntBASIC11.71□□□□□ -0.53
VclQ64727 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Gm7003-201ENSMUST00000195089 312 ntBASIC11.71□□□□□ -0.53
VclQ64727 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.71□□□□□ -0.53
VclQ64727 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.71□□□□□ -0.53
VclQ64727 Gm2553-201ENSMUST00000215986 605 ntBASIC11.71□□□□□ -0.53
VclQ64727 Gm807-202ENSMUST00000224929 408 ntBASIC11.71□□□□□ -0.53
VclQ64727 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.71□□□□□ -0.53
VclQ64727 Gm5705-201ENSMUST00000066241 711 ntBASIC11.71□□□□□ -0.53
VclQ64727 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VclQ64727 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.71□□□□□ -0.53
VclQ64727 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.71□□□□□ -0.53
VclQ64727 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
VclQ64727 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
VclQ64727 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
VclQ64727 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.71□□□□□ -0.54
VclQ64727 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VclQ64727 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VclQ64727 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.71□□□□□ -0.54
VclQ64727 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
VclQ64727 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.7□□□□□ -0.54
VclQ64727 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.7□□□□□ -0.54
VclQ64727 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VclQ64727 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.7□□□□□ -0.54
VclQ64727 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.7□□□□□ -0.54
VclQ64727 Gm19287-201ENSMUST00000203190 358 ntBASIC11.7□□□□□ -0.54
VclQ64727 Gm17931-201ENSMUST00000208132 634 ntBASIC11.7□□□□□ -0.54
VclQ64727 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.7□□□□□ -0.54
VclQ64727 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VclQ64727 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.7□□□□□ -0.54
VclQ64727 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VclQ64727 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms