Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
AtmQ62388 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
AtmQ62388 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.94□□□□□ -0.66
AtmQ62388 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.94□□□□□ -0.66
AtmQ62388 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
AtmQ62388 Gm6216-201ENSMUST00000182390 687 ntBASIC10.94□□□□□ -0.66
AtmQ62388 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
AtmQ62388 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm11473-201ENSMUST00000118980 359 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gm15815-201ENSMUST00000120569 255 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 Gm9162-201ENSMUST00000182081 991 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.93□□□□□ -0.66
AtmQ62388 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gm5468-202ENSMUST00000227851 682 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm4978-201ENSMUST00000071565 801 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
AtmQ62388 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
AtmQ62388 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.93□□□□□ -0.66
AtmQ62388 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
AtmQ62388 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
AtmQ62388 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm22661-201ENSMUST00000104192 132 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 Gm12247-201ENSMUST00000117585 670 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
AtmQ62388 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.93□□□□□ -0.66
AtmQ62388 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
AtmQ62388 Gm44323-201ENSMUST00000198689 129 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gm9487-201ENSMUST00000216600 472 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.93□□□□□ -0.66
AtmQ62388 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
AtmQ62388 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.93□□□□□ -0.66
AtmQ62388 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.92□□□□□ -0.66
AtmQ62388 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Gm14829-201ENSMUST00000121499 1138 ntBASIC10.92□□□□□ -0.66
AtmQ62388 Gm24992-201ENSMUST00000157412 130 ntBASIC10.92□□□□□ -0.66
AtmQ62388 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
AtmQ62388 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Gm8019-201ENSMUST00000119317 587 ntBASIC10.92□□□□□ -0.66
AtmQ62388 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.92□□□□□ -0.66
AtmQ62388 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.92□□□□□ -0.66
AtmQ62388 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
AtmQ62388 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms