Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.73□□□□□ -0.21
Scn9aQ62205 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Gm13094-201ENSMUST00000117930 409 ntBASIC13.73□□□□□ -0.21
Scn9aQ62205 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.73□□□□□ -0.21
Scn9aQ62205 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.73□□□□□ -0.21
Scn9aQ62205 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn9aQ62205 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.73□□□□□ -0.21
Scn9aQ62205 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn9aQ62205 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.72□□□□□ -0.21
Scn9aQ62205 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm15982-201ENSMUST00000121681 554 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn9aQ62205 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.72□□□□□ -0.21
Scn9aQ62205 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn9aQ62205 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn9aQ62205 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.71□□□□□ -0.21
Scn9aQ62205 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms