Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Gm5705-201ENSMUST00000066241 711 ntBASIC10.83□□□□□ -0.68
AtrxQ61687 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
AtrxQ61687 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
AtrxQ61687 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 Gm5714-201ENSMUST00000197343 566 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.82□□□□□ -0.68
AtrxQ61687 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
AtrxQ61687 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.82□□□□□ -0.68
AtrxQ61687 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
AtrxQ61687 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
AtrxQ61687 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.82□□□□□ -0.68
AtrxQ61687 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.82□□□□□ -0.68
AtrxQ61687 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm6331-201ENSMUST00000217890 450 ntBASIC10.82□□□□□ -0.68
AtrxQ61687 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
AtrxQ61687 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
AtrxQ61687 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.81□□□□□ -0.68
AtrxQ61687 Gm45094-201ENSMUST00000207013 617 ntBASIC10.81□□□□□ -0.68
AtrxQ61687 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.81□□□□□ -0.68
AtrxQ61687 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
AtrxQ61687 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.81□□□□□ -0.68
AtrxQ61687 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
AtrxQ61687 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms