Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ClpbQ60649 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.43□□□□□ -0.58
ClpbQ60649 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.43□□□□□ -0.58
ClpbQ60649 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Rps4l-202ENSMUST00000204242 789 ntBASIC11.43□□□□□ -0.58
ClpbQ60649 Gm8913-201ENSMUST00000209491 641 ntBASIC11.43□□□□□ -0.58
ClpbQ60649 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm19994-201ENSMUST00000217086 586 ntBASIC11.43□□□□□ -0.58
ClpbQ60649 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ClpbQ60649 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ClpbQ60649 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.43□□□□□ -0.58
ClpbQ60649 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.43□□□□□ -0.58
ClpbQ60649 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
ClpbQ60649 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ClpbQ60649 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpbQ60649 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpbQ60649 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm14028-201ENSMUST00000117434 479 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.42□□□□□ -0.58
ClpbQ60649 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpbQ60649 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
ClpbQ60649 Gm27627-201ENSMUST00000183644 150 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm29615-201ENSMUST00000185371 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28224-201ENSMUST00000186078 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm29001-201ENSMUST00000186177 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28292-201ENSMUST00000186593 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28101-201ENSMUST00000187608 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm29076-201ENSMUST00000187689 697 ntBASIC11.42□□□□□ -0.58
ClpbQ60649 Gm28302-201ENSMUST00000187931 697 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms