Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gm14247-201ENSMUST00000120950 237 ntBASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.34□□□□□ -0.59
Nr1h4Q60641 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gm40466-201ENSMUST00000212174 422 ntBASIC11.34□□□□□ -0.59
Nr1h4Q60641 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nr1h4Q60641 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nr1h4Q60641 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Nr1h4Q60641 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Nr1h4Q60641 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm15610-201ENSMUST00000120584 195 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Rprl1-201ENSMUST00000158050 327 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.33□□□□□ -0.6
Nr1h4Q60641 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nr1h4Q60641 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 BC043934-202ENSMUST00000185694 2356 ntBASIC11.32□□□□□ -0.6
Nr1h4Q60641 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.32□□□□□ -0.6
Nr1h4Q60641 Gm25261-201ENSMUST00000157416 134 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms