Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Rgr-203ENSMUST00000225070 4704 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.35□□□□□ -0.43
Trim38Q5SZ99 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim38Q5SZ99 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm24255-201ENSMUST00000104481 128 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm43758-201ENSMUST00000199500 367 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm4607-201ENSMUST00000206649 577 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim38Q5SZ99 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
Trim38Q5SZ99 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm13296-201ENSMUST00000117854 997 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm14723-201ENSMUST00000118686 215 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm13665-201ENSMUST00000120830 528 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.33□□□□□ -0.44
Trim38Q5SZ99 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms