Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Urb1Q571H0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.96□□□□□ -0.65
Urb1Q571H0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Urb1Q571H0 Gm8894-201ENSMUST00000074642 666 ntBASIC10.96□□□□□ -0.65
Urb1Q571H0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Urb1Q571H0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Urb1Q571H0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Urb1Q571H0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.96□□□□□ -0.66
Urb1Q571H0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Urb1Q571H0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm3551-201ENSMUST00000190750 664 ntBASIC10.96□□□□□ -0.66
Urb1Q571H0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm18204-201ENSMUST00000209835 793 ntBASIC10.96□□□□□ -0.66
Urb1Q571H0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.96□□□□□ -0.66
Urb1Q571H0 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.96□□□□□ -0.66
Urb1Q571H0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Urb1Q571H0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Urb1Q571H0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Urb1Q571H0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.95□□□□□ -0.66
Urb1Q571H0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.95□□□□□ -0.66
Urb1Q571H0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm25201-201ENSMUST00000083093 170 ntBASIC10.95□□□□□ -0.66
Urb1Q571H0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Urb1Q571H0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.95□□□□□ -0.66
Urb1Q571H0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms