Protein–RNA interactions for Protein: Q3UW22

Defb48, Beta-defensin 42, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb48Q3UW22 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Defb48Q3UW22 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm12579-201ENSMUST00000118040 783 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm6114-201ENSMUST00000182472 968 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm37986-201ENSMUST00000193285 383 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm5714-201ENSMUST00000197343 566 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm6450-201ENSMUST00000200896 574 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Matn2-203ENSMUST00000226766 3252 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.61□□□□□ -0.55
Defb48Q3UW22 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Defb48Q3UW22 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm13916-201ENSMUST00000117368 628 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm13408-201ENSMUST00000119822 798 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm15595-201ENSMUST00000120840 961 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm13935-201ENSMUST00000121859 798 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm22902-201ENSMUST00000158488 302 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm28937-201ENSMUST00000185413 695 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm29400-201ENSMUST00000187208 695 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm28662-201ENSMUST00000188446 695 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm10774-201ENSMUST00000188689 204 ntBASIC11.6□□□□□ -0.55
Defb48Q3UW22 Gm28251-201ENSMUST00000188835 695 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms