Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm8255-201ENSMUST00000218693 305 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm11540-201ENSMUST00000117457 780 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm16547-201ENSMUST00000159474 293 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm4705-201ENSMUST00000177415 354 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm18042-201ENSMUST00000219887 790 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm9095-201ENSMUST00000117607 881 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm9097-201ENSMUST00000120514 880 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm11993-201ENSMUST00000121861 820 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm5808-201ENSMUST00000178090 357 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm13505-201ENSMUST00000121666 817 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Spg11Q3UHA3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm44605-201ENSMUST00000206892 949 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm5468-202ENSMUST00000227851 682 ntBASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Spg11Q3UHA3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms