Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Brf2Q3UAW9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm20482-202ENSMUST00000174729 825 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm43822-201ENSMUST00000200285 476 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm9899-201ENSMUST00000065519 555 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Brf2Q3UAW9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Brf2Q3UAW9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms