Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mir1247-201ENSMUST00000116706 82 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm15198-201ENSMUST00000117283 177 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm15610-201ENSMUST00000120584 195 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm25261-201ENSMUST00000157416 134 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm3961-201ENSMUST00000204425 994 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.6□□□□□ -0.39
Trim43aQ3TL54 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim43aQ3TL54 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm24548-201ENSMUST00000158650 108 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm38241-201ENSMUST00000192641 898 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm38266-201ENSMUST00000194931 421 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm43133-201ENSMUST00000197472 463 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Gm43179-201ENSMUST00000198797 275 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43aQ3TL54 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43aQ3TL54 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.58□□□□□ -0.4
Trim43aQ3TL54 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm22018-201ENSMUST00000104357 131 ntBASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim43aQ3TL54 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms