Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Khdc4Q3TCX3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Khdc4Q3TCX3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Khdc4Q3TCX3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.59
Khdc4Q3TCX3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm15432-201ENSMUST00000121106 195 ntBASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm44958-201ENSMUST00000203734 736 ntBASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc4Q3TCX3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms