Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm14760-201ENSMUST00000121831 999 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm4804-201ENSMUST00000182234 999 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm5178-201ENSMUST00000219380 898 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim63Q38HM4 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm15460-201ENSMUST00000118147 391 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm27459-201ENSMUST00000184860 107 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.72□□□□□ -0.85
Trim63Q38HM4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trim63Q38HM4 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.72□□□□□ -0.85
Trim63Q38HM4 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.71□□□□□ -0.85
Trim63Q38HM4 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim63Q38HM4 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms