Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 AC124555.1-201ENSMUST00000227051 880 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 AC174647.1-201ENSMUST00000227419 1271 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm36990-201ENSMUST00000191961 1412 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm6721-201ENSMUST00000218353 1445 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm44664-201ENSMUST00000206841 1786 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm12464-201ENSMUST00000121385 1016 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm40-201ENSMUST00000122131 660 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Mir8111-201ENSMUST00000184463 137 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm42915-201ENSMUST00000197478 323 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Gm42859-201ENSMUST00000199572 193 ntBASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ush2AQ2QI47 Il17rd-203ENSMUST00000225146 3366 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm9133-201ENSMUST00000118289 540 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm6038-201ENSMUST00000154310 948 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm37559-201ENSMUST00000193556 832 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm7812-201ENSMUST00000203479 874 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm9434-201ENSMUST00000118975 813 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm14111-201ENSMUST00000119851 999 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Mir6940-201ENSMUST00000183447 70 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Mir6909-201ENSMUST00000184212 62 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm8055-201ENSMUST00000099956 1008 ntBASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ush2AQ2QI47 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms