Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm9463-201ENSMUST00000206707 601 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.42□□□□□ -0.58
Hoxc4Q08624 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm44126-201ENSMUST00000204831 514 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm4978-201ENSMUST00000071565 801 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Snora73b-201ENSMUST00000083419 205 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.41□□□□□ -0.58
Hoxc4Q08624 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hoxc4Q08624 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.4□□□□□ -0.58
Hoxc4Q08624 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm14942-201ENSMUST00000119642 336 ntBASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm11667-201ENSMUST00000119828 486 ntBASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.4□□□□□ -0.58
Hoxc4Q08624 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms