Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.09□□□□□ -0.47
Ebf1Q07802 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.09□□□□□ -0.47
Ebf1Q07802 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ebf1Q07802 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ebf1Q07802 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ebf1Q07802 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.08□□□□□ -0.48
Ebf1Q07802 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.08□□□□□ -0.48
Ebf1Q07802 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm16397-201ENSMUST00000122201 494 ntBASIC12.08□□□□□ -0.48
Ebf1Q07802 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm19287-201ENSMUST00000203190 358 ntBASIC12.08□□□□□ -0.48
Ebf1Q07802 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.08□□□□□ -0.48
Ebf1Q07802 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ebf1Q07802 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf1Q07802 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf1Q07802 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ebf1Q07802 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf1Q07802 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm15573-201ENSMUST00000119487 540 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm14585-201ENSMUST00000120713 634 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.07□□□□□ -0.48
Ebf1Q07802 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf1Q07802 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.07□□□□□ -0.48
Ebf1Q07802 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf1Q07802 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf1Q07802 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf1Q07802 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms