Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.86□□□□□ -0.35
Col9a2Q07643 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.86□□□□□ -0.35
Col9a2Q07643 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a2Q07643 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a2Q07643 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm11675-201ENSMUST00000121873 832 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.85□□□□□ -0.35
Col9a2Q07643 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm23771-201ENSMUST00000178702 110 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm12407-201ENSMUST00000180219 324 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm27910-201ENSMUST00000185004 107 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm42599-201ENSMUST00000201308 469 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm44980-201ENSMUST00000205826 314 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm2517-201ENSMUST00000215651 348 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.85□□□□□ -0.35
Col9a2Q07643 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a2Q07643 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col9a2Q07643 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm5982-201ENSMUST00000196234 512 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm42657-201ENSMUST00000201746 211 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 Olfr584-201ENSMUST00000098210 964 ntBASIC12.84□□□□□ -0.35
Col9a2Q07643 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Col9a2Q07643 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col9a2Q07643 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms