Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.73□□□□□ -0.37
VcpQ01853 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.73□□□□□ -0.37
VcpQ01853 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.73□□□□□ -0.37
VcpQ01853 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VcpQ01853 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.73□□□□□ -0.37
VcpQ01853 Mir6546-201ENSMUST00000184460 62 ntBASIC12.73□□□□□ -0.37
VcpQ01853 Gm4034-201ENSMUST00000187674 480 ntBASIC12.73□□□□□ -0.37
VcpQ01853 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
VcpQ01853 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.73□□□□□ -0.37
VcpQ01853 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.73□□□□□ -0.37
VcpQ01853 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.73□□□□□ -0.37
VcpQ01853 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.73□□□□□ -0.37
VcpQ01853 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VcpQ01853 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VcpQ01853 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VcpQ01853 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VcpQ01853 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.72□□□□□ -0.37
VcpQ01853 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Gm23949-201ENSMUST00000104027 127 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.72□□□□□ -0.37
VcpQ01853 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.72□□□□□ -0.37
VcpQ01853 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VcpQ01853 Gm27627-201ENSMUST00000183644 150 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.72□□□□□ -0.37
VcpQ01853 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.72□□□□□ -0.37
VcpQ01853 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VcpQ01853 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
VcpQ01853 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VcpQ01853 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.71□□□□□ -0.37
VcpQ01853 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Gm23251-201ENSMUST00000103773 110 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
VcpQ01853 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Gm25072-201ENSMUST00000175233 235 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Gm9358-201ENSMUST00000183067 927 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.71□□□□□ -0.37
VcpQ01853 Gm45550-201ENSMUST00000209380 946 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Gm45598-202ENSMUST00000210719 986 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.71□□□□□ -0.37
VcpQ01853 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.71□□□□□ -0.37
VcpQ01853 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VcpQ01853 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VcpQ01853 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms