Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Scn1bP97952 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.85□□□□□ -0.67
Scn1bP97952 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Scn1bP97952 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.84□□□□□ -0.67
Scn1bP97952 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm16296-201ENSMUST00000159905 325 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.84□□□□□ -0.67
Scn1bP97952 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm8463-201ENSMUST00000208573 613 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Gm45384-201ENSMUST00000210451 277 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Scn1bP97952 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.84□□□□□ -0.67
Scn1bP97952 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Scn1bP97952 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Scn1bP97952 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Scn1bP97952 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.83□□□□□ -0.67
Scn1bP97952 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.83□□□□□ -0.68
Scn1bP97952 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.83□□□□□ -0.68
Scn1bP97952 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Scn1bP97952 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.83□□□□□ -0.68
Scn1bP97952 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm13612-201ENSMUST00000119276 390 ntBASIC10.83□□□□□ -0.68
Scn1bP97952 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Scn1bP97952 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.83□□□□□ -0.68
Scn1bP97952 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Scn1bP97952 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms