Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.28□□□□□ -0.6
Nkx3-2P97503 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm43184-201ENSMUST00000197247 542 ntBASIC11.28□□□□□ -0.6
Nkx3-2P97503 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.28□□□□□ -0.6
Nkx3-2P97503 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx3-2P97503 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx3-2P97503 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.27□□□□□ -0.61
Nkx3-2P97503 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.27□□□□□ -0.61
Nkx3-2P97503 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.27□□□□□ -0.61
Nkx3-2P97503 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nkx3-2P97503 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx3-2P97503 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm9062-201ENSMUST00000117712 727 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm14724-201ENSMUST00000118400 537 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm11331-201ENSMUST00000119764 288 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm14247-201ENSMUST00000120950 237 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm42997-202ENSMUST00000200321 985 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm4482-201ENSMUST00000200876 742 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.26□□□□□ -0.61
Nkx3-2P97503 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm4157-201ENSMUST00000211647 679 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx3-2P97503 Gm21811-201ENSMUST00000096485 930 ntBASIC11.26□□□□□ -0.61
Nkx3-2P97503 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms