Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm42816-201ENSMUST00000198433 325 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm18561-201ENSMUST00000206027 804 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm18460-201ENSMUST00000208088 464 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm19640-201ENSMUST00000214849 464 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm18514-201ENSMUST00000218980 436 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.86□□□□□ -0.03
Smarcc1P97496 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcc1P97496 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc1P97496 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm8723-201ENSMUST00000166076 820 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm8701-201ENSMUST00000169259 874 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm16380-201ENSMUST00000077997 478 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.85□□□□□ -0.03
Smarcc1P97496 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcc1P97496 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcc1P97496 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.84□□□□□ -0.03
Smarcc1P97496 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.84□□□□□ -0.03
Smarcc1P97496 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcc1P97496 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm12948-201ENSMUST00000119406 682 ntBASIC14.84□□□□□ -0.03
Smarcc1P97496 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.84□□□□□ -0.03
Smarcc1P97496 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms