Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Lig3P97386 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.06□□□□□ -0.32
Lig3P97386 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Gm23363-201ENSMUST00000175024 79 ntBASIC13.06□□□□□ -0.32
Lig3P97386 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Gm45598-202ENSMUST00000210719 986 ntBASIC13.06□□□□□ -0.32
Lig3P97386 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.06□□□□□ -0.32
Lig3P97386 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.06□□□□□ -0.32
Lig3P97386 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lig3P97386 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lig3P97386 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.05□□□□□ -0.32
Lig3P97386 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lig3P97386 Gm12015-201ENSMUST00000117065 843 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Gm10051-201ENSMUST00000145209 414 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.05□□□□□ -0.32
Lig3P97386 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.05□□□□□ -0.32
Lig3P97386 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.05□□□□□ -0.32
Lig3P97386 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.05□□□□□ -0.32
Lig3P97386 Gm8365-201ENSMUST00000197334 648 ntBASIC13.05□□□□□ -0.32
Lig3P97386 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.05□□□□□ -0.32
Lig3P97386 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Lig3P97386 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.05□□□□□ -0.32
Lig3P97386 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lig3P97386 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Lig3P97386 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.05□□□□□ -0.32
Lig3P97386 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lig3P97386 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.04□□□□□ -0.32
Lig3P97386 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lig3P97386 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.04□□□□□ -0.32
Lig3P97386 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.04□□□□□ -0.32
Lig3P97386 Gm12165-201ENSMUST00000117047 342 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Gm12380-201ENSMUST00000119012 544 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Gm29155-201ENSMUST00000185910 269 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Gm18893-201ENSMUST00000198416 943 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Gm43916-201ENSMUST00000205062 967 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Lig3P97386 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.04□□□□□ -0.32
Lig3P97386 Gm5369-201ENSMUST00000217499 588 ntBASIC13.04□□□□□ -0.32
Lig3P97386 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.04□□□□□ -0.32
Lig3P97386 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms