Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Usp9xP70398 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Usp9xP70398 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp9xP70398 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm8152-201ENSMUST00000120842 637 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Gm14760-201ENSMUST00000121831 999 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC9.81□□□□□ -0.84
Usp9xP70398 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.81□□□□□ -0.84
Usp9xP70398 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm17825-201ENSMUST00000206836 794 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Usp9xP70398 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Usp9xP70398 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Gm7940-201ENSMUST00000218195 769 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Usp9xP70398 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Usp9xP70398 AC174797.2-201ENSMUST00000225835 165 ntBASIC9.81□□□□□ -0.84
Usp9xP70398 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp9xP70398 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp9xP70398 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Gm11996-201ENSMUST00000117538 915 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm6606-201ENSMUST00000193613 947 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Gm43726-201ENSMUST00000199110 775 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Gm7504-201ENSMUST00000201449 424 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.8□□□□□ -0.84
Usp9xP70398 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp9xP70398 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Usp9xP70398 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC9.8□□□□□ -0.84
Usp9xP70398 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.8□□□□□ -0.84
Usp9xP70398 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Usp9xP70398 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms