Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm10254-201ENSMUST00000052888 867 ntBASIC10.57□□□□□ -0.72
Sf3b6P59708 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sf3b6P59708 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm24934-201ENSMUST00000103764 111 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm12502-201ENSMUST00000120197 444 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm8502-201ENSMUST00000185708 901 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm21147-201ENSMUST00000186046 913 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm8510-201ENSMUST00000189202 895 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm2316-201ENSMUST00000190613 921 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.56□□□□□ -0.72
Sf3b6P59708 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm43452-201ENSMUST00000201873 991 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm45574-201ENSMUST00000210921 331 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sf3b6P59708 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.56□□□□□ -0.72
Sf3b6P59708 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b6P59708 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b6P59708 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm17420-201ENSMUST00000164753 153 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm38314-201ENSMUST00000195709 625 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 AC154634.3-201ENSMUST00000224589 736 ntBASIC10.55□□□□□ -0.72
Sf3b6P59708 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sf3b6P59708 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b6P59708 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms