Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.24□□□□□ -0.29
Tpm1P58771 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Gm13342-201ENSMUST00000121055 207 ntBASIC13.24□□□□□ -0.29
Tpm1P58771 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Tpm1P58771 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.24□□□□□ -0.29
Tpm1P58771 Gm42693-201ENSMUST00000196779 631 ntBASIC13.24□□□□□ -0.29
Tpm1P58771 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.24□□□□□ -0.29
Tpm1P58771 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tpm1P58771 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Tpm1P58771 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.23□□□□□ -0.29
Tpm1P58771 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC13.23□□□□□ -0.29
Tpm1P58771 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.23□□□□□ -0.29
Tpm1P58771 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tpm1P58771 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.23□□□□□ -0.29
Tpm1P58771 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm24934-201ENSMUST00000103764 111 ntBASIC13.23□□□□□ -0.29
Tpm1P58771 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm13736-201ENSMUST00000119272 253 ntBASIC13.23□□□□□ -0.29
Tpm1P58771 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.23□□□□□ -0.29
Tpm1P58771 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Tpm1P58771 Gm6091-201ENSMUST00000098307 165 ntBASIC13.23□□□□□ -0.29
Tpm1P58771 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.23□□□□□ -0.29
Tpm1P58771 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Tpm1P58771 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Tpm1P58771 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tpm1P58771 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Tpm1P58771 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.22□□□□□ -0.29
Tpm1P58771 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
Tpm1P58771 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.22□□□□□ -0.29
Tpm1P58771 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm8738-201ENSMUST00000172606 329 ntBASIC13.22□□□□□ -0.29
Tpm1P58771 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.22□□□□□ -0.29
Tpm1P58771 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tpm1P58771 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms