Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sssca1P56873 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sssca1P56873 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Sssca1P56873 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm15610-201ENSMUST00000120584 195 ntBASIC9.58□□□□□ -0.88
Sssca1P56873 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.58□□□□□ -0.88
Sssca1P56873 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Rprl1-201ENSMUST00000158050 327 ntBASIC9.58□□□□□ -0.88
Sssca1P56873 Gm24548-201ENSMUST00000158650 108 ntBASIC9.58□□□□□ -0.88
Sssca1P56873 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.58□□□□□ -0.88
Sssca1P56873 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.58□□□□□ -0.88
Sssca1P56873 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.58□□□□□ -0.88
Sssca1P56873 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Sssca1P56873 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Sssca1P56873 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sssca1P56873 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.57□□□□□ -0.88
Sssca1P56873 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Gm14247-201ENSMUST00000120950 237 ntBASIC9.57□□□□□ -0.88
Sssca1P56873 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.57□□□□□ -0.88
Sssca1P56873 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Gm17931-201ENSMUST00000208132 634 ntBASIC9.57□□□□□ -0.88
Sssca1P56873 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.57□□□□□ -0.88
Sssca1P56873 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.57□□□□□ -0.88
Sssca1P56873 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Sssca1P56873 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sssca1P56873 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms