Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm6722-201ENSMUST00000221586 390 ntBASIC14.99□□□□□ -0.01
Msh6P54276 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.99□□□□□ -0.01
Msh6P54276 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msh6P54276 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Msh6P54276 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh6P54276 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh6P54276 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Msh6P54276 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Msh6P54276 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Mir8093-201ENSMUST00000185043 137 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.98□□□□□ -0.01
Msh6P54276 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Msh6P54276 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Gm38314-201ENSMUST00000195709 625 ntBASIC14.98□□□□□ -0.01
Msh6P54276 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Gm5982-201ENSMUST00000196234 512 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Gm18059-201ENSMUST00000208073 580 ntBASIC14.98□□□□□ -0.01
Msh6P54276 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh6P54276 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh6P54276 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Msh6P54276 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.97□□□□□ -0.01
Msh6P54276 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.97□□□□□ -0.01
Msh6P54276 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.97□□□□□ -0.01
Msh6P54276 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Msh6P54276 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msh6P54276 Gm13549-201ENSMUST00000118339 796 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Gm11783-201ENSMUST00000119549 885 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh6P54276 Gm37981-201ENSMUST00000194280 535 ntBASIC14.97□□□□□ -0.01
Msh6P54276 Gm35960-201ENSMUST00000202712 767 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms