Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Atxn1P54254 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Atxn1P54254 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atxn1P54254 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Gm26013-201ENSMUST00000104404 119 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Atxn1P54254 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atxn1P54254 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atxn1P54254 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atxn1P54254 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atxn1P54254 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.84□□□□□ -0.51
Atxn1P54254 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.84□□□□□ -0.51
Atxn1P54254 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.84□□□□□ -0.51
Atxn1P54254 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atxn1P54254 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atxn1P54254 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atxn1P54254 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Atxn1P54254 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atxn1P54254 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atxn1P54254 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atxn1P54254 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atxn1P54254 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atxn1P54254 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Atxn1P54254 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.83□□□□□ -0.52
Atxn1P54254 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.83□□□□□ -0.52
Atxn1P54254 Gm11509-201ENSMUST00000117358 325 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Gm8737-201ENSMUST00000122208 642 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.83□□□□□ -0.52
Atxn1P54254 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.83□□□□□ -0.52
Atxn1P54254 Gm23045-201ENSMUST00000175041 96 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Atxn1P54254 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Gm43186-201ENSMUST00000198130 824 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Gm18059-201ENSMUST00000208073 580 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atxn1P54254 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atxn1P54254 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atxn1P54254 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.83□□□□□ -0.52
Atxn1P54254 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Atxn1P54254 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atxn1P54254 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atxn1P54254 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Atxn1P54254 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.82□□□□□ -0.52
Atxn1P54254 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms