Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HttP42859 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.23□□□□□ -0.45
HttP42859 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.23□□□□□ -0.45
HttP42859 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
HttP42859 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.23□□□□□ -0.45
HttP42859 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.23□□□□□ -0.45
HttP42859 Gm42687-201ENSMUST00000199075 164 ntBASIC12.23□□□□□ -0.45
HttP42859 Gm44304-201ENSMUST00000200509 145 ntBASIC12.23□□□□□ -0.45
HttP42859 AC164614.1-201ENSMUST00000216038 397 ntBASIC12.23□□□□□ -0.45
HttP42859 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.23□□□□□ -0.45
HttP42859 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HttP42859 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.23□□□□□ -0.45
HttP42859 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.23□□□□□ -0.45
HttP42859 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HttP42859 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HttP42859 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Gm9095-201ENSMUST00000117607 881 ntBASIC12.22□□□□□ -0.45
HttP42859 Gm9097-201ENSMUST00000120514 880 ntBASIC12.22□□□□□ -0.45
HttP42859 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Gm37009-201ENSMUST00000193297 361 ntBASIC12.22□□□□□ -0.45
HttP42859 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.22□□□□□ -0.45
HttP42859 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
HttP42859 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.22□□□□□ -0.45
HttP42859 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.22□□□□□ -0.45
HttP42859 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC12.22□□□□□ -0.45
HttP42859 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
HttP42859 Gm5738-201ENSMUST00000206016 779 ntBASIC12.22□□□□□ -0.45
HttP42859 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HttP42859 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HttP42859 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HttP42859 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.22□□□□□ -0.45
HttP42859 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.22□□□□□ -0.45
HttP42859 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
HttP42859 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HttP42859 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Gm21631-201ENSMUST00000195041 754 ntBASIC12.22□□□□□ -0.45
HttP42859 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.22□□□□□ -0.45
HttP42859 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.22□□□□□ -0.45
HttP42859 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HttP42859 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HttP42859 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HttP42859 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HttP42859 Gm9409-201ENSMUST00000197017 316 ntBASIC12.21□□□□□ -0.45
HttP42859 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms