Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm11957-201ENSMUST00000118304 779 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm42511-201ENSMUST00000196160 234 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.21□□□□□ -0.45
Cxcl12P40224 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cxcl12P40224 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.21□□□□□ -0.46
Cxcl12P40224 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cxcl12P40224 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Mir453-201ENSMUST00000104732 82 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm14234-201ENSMUST00000119539 845 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm12906-201ENSMUST00000154610 441 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm16030-201ENSMUST00000159098 603 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm11942-201ENSMUST00000180255 345 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Cxcl12P40224 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.2□□□□□ -0.46
Cxcl12P40224 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cxcl12P40224 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.2□□□□□ -0.46
Cxcl12P40224 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm12247-201ENSMUST00000117585 670 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm24809-201ENSMUST00000175318 271 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm25998-201ENSMUST00000175397 53 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm42430-201ENSMUST00000197209 616 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm44216-201ENSMUST00000203942 157 ntBASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cxcl12P40224 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.19□□□□□ -0.46
Cxcl12P40224 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms