Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm25591-201ENSMUST00000177317 94 ntBASIC17.43■□□□□ 0.38
Chd1P40201 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC17.43■□□□□ 0.38
Chd1P40201 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chd1P40201 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chd1P40201 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd1P40201 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chd1P40201 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC17.42■□□□□ 0.38
Chd1P40201 Gm5291-201ENSMUST00000201965 899 ntBASIC17.42■□□□□ 0.38
Chd1P40201 Gm7242-201ENSMUST00000221134 705 ntBASIC17.42■□□□□ 0.38
Chd1P40201 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.42■□□□□ 0.38
Chd1P40201 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Gm5053-201ENSMUST00000208361 1678 ntBASIC17.42■□□□□ 0.38
Chd1P40201 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chd1P40201 Gm42971-201ENSMUST00000199228 2079 ntBASIC17.42■□□□□ 0.38
Chd1P40201 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd1P40201 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Gm14997-201ENSMUST00000119232 636 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Gm7805-201ENSMUST00000154348 448 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd1P40201 Gm8525-201ENSMUST00000189674 861 ntBASIC17.41■□□□□ 0.38
Chd1P40201 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Gm7880-201ENSMUST00000203748 871 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd1P40201 CT030035.1-201ENSMUST00000223964 935 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd1P40201 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chd1P40201 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Gm14005-209ENSMUST00000224993 1832 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Gm14148-201ENSMUST00000122433 1008 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd1P40201 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd1P40201 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 AC241616.1-201ENSMUST00000213741 166 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 AC124356.1-201ENSMUST00000221469 698 ntBASIC17.41■□□□□ 0.38
Chd1P40201 AC134913.2-201ENSMUST00000225017 771 ntBASIC17.41■□□□□ 0.38
Chd1P40201 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd1P40201 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chd1P40201 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC17.41■□□□□ 0.38
Chd1P40201 Gm8725-201ENSMUST00000221829 1333 ntBASIC17.4■□□□□ 0.38
Chd1P40201 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chd1P40201 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chd1P40201 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Gm5944-201ENSMUST00000118182 1001 ntBASIC17.4■□□□□ 0.38
Chd1P40201 Gm44008-201ENSMUST00000204345 412 ntBASIC17.4■□□□□ 0.38
Chd1P40201 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC17.4■□□□□ 0.38
Chd1P40201 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC17.4■□□□□ 0.38
Chd1P40201 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC17.4■□□□□ 0.38
Chd1P40201 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chd1P40201 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Chd1P40201 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.4■□□□□ 0.38
Chd1P40201 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Chd1P40201 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd1P40201 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Chd1P40201 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
Chd1P40201 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Chd1P40201 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms