Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Gm5616-201ENSMUST00000165252 384 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm17376-201ENSMUST00000166016 84 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm8741-201ENSMUST00000174736 384 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Gm38314-201ENSMUST00000195709 625 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm2553-201ENSMUST00000215986 605 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.41□□□□□ -0.74
Upk2P38575 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Upk2P38575 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.41□□□□□ -0.74
Upk2P38575 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.41□□□□□ -0.74
Upk2P38575 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Upk2P38575 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Upk2P38575 Gm13996-201ENSMUST00000118456 430 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm11960-201ENSMUST00000122068 925 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Upk2P38575 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.4□□□□□ -0.74
Upk2P38575 Gm27627-201ENSMUST00000183644 150 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.4□□□□□ -0.74
Upk2P38575 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 AY036118-201ENSMUST00000200021 923 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm17812-201ENSMUST00000204935 318 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Gm17827-201ENSMUST00000211825 742 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm6082-201ENSMUST00000215204 454 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Upk2P38575 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Upk2P38575 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.4□□□□□ -0.74
Upk2P38575 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Upk2P38575 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.4□□□□□ -0.74
Upk2P38575 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Upk2P38575 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms