Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.38□□□□□ -0.91
Rom1P32958 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.38□□□□□ -0.91
Rom1P32958 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Gm4271-201ENSMUST00000174444 973 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Mir7023-201ENSMUST00000185093 64 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Gm28911-201ENSMUST00000188837 117 ntBASIC9.38□□□□□ -0.91
Rom1P32958 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.38□□□□□ -0.91
Rom1P32958 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm44855-201ENSMUST00000205725 362 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm17931-201ENSMUST00000208132 634 ntBASIC9.38□□□□□ -0.91
Rom1P32958 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Rom1P32958 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Rom1P32958 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.38□□□□□ -0.91
Rom1P32958 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Rom1P32958 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.38□□□□□ -0.91
Rom1P32958 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rom1P32958 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Rom1P32958 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm13736-201ENSMUST00000119272 253 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Gm14057-201ENSMUST00000120631 482 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.37□□□□□ -0.91
Rom1P32958 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.37□□□□□ -0.91
Rom1P32958 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Gm37935-201ENSMUST00000192012 982 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.37□□□□□ -0.91
Rom1P32958 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.37□□□□□ -0.91
Rom1P32958 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Rom1P32958 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms