Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm8741-201ENSMUST00000174736 384 ntBASIC10.79□□□□□ -0.68
VtnP29788 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.79□□□□□ -0.68
VtnP29788 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.79□□□□□ -0.68
VtnP29788 AY036118-201ENSMUST00000200021 923 ntBASIC10.79□□□□□ -0.68
VtnP29788 Gm17827-201ENSMUST00000211825 742 ntBASIC10.79□□□□□ -0.68
VtnP29788 Gm8959-201ENSMUST00000213150 571 ntBASIC10.79□□□□□ -0.68
VtnP29788 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.79□□□□□ -0.68
VtnP29788 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.79□□□□□ -0.68
VtnP29788 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VtnP29788 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VtnP29788 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.79□□□□□ -0.68
VtnP29788 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VtnP29788 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
VtnP29788 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.78□□□□□ -0.68
VtnP29788 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.78□□□□□ -0.68
VtnP29788 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.78□□□□□ -0.68
VtnP29788 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
VtnP29788 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Gm11511-201ENSMUST00000118146 540 ntBASIC10.78□□□□□ -0.68
VtnP29788 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.78□□□□□ -0.68
VtnP29788 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.78□□□□□ -0.68
VtnP29788 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.78□□□□□ -0.68
VtnP29788 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
VtnP29788 Gm24514-201ENSMUST00000174961 285 ntBASIC10.78□□□□□ -0.68
VtnP29788 AU022133-201ENSMUST00000200601 873 ntBASIC10.78□□□□□ -0.68
VtnP29788 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Gm8956-201ENSMUST00000203939 825 ntBASIC10.78□□□□□ -0.68
VtnP29788 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
VtnP29788 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.78□□□□□ -0.68
VtnP29788 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
VtnP29788 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VtnP29788 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.77□□□□□ -0.68
VtnP29788 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
VtnP29788 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VtnP29788 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.77□□□□□ -0.68
VtnP29788 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VtnP29788 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
VtnP29788 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
VtnP29788 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VtnP29788 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VtnP29788 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
VtnP29788 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VtnP29788 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.77□□□□□ -0.69
VtnP29788 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.77□□□□□ -0.69
VtnP29788 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.77□□□□□ -0.69
VtnP29788 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VtnP29788 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms